scsilhouette
Topics
Using scsilhouette from the Command Line
Compute Silhouette Scores
Visualize Summary Statistics
Visualize Correlation
Visualize Dotplot
Visualize Distribution
scsilhouette
scsilhouette.nsforest module
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scsilhouette.nsforest module
scsilhouette.nsforest.
extract_binary_genes
(
nsforest_path
:
str
,
output_path
:
str
)
[source]
scsilhouette.nsforest.
load_binary_gene_list
(
gene_list_path
:
Path
)
→
List
[
str
]
[source]
scsilhouette.nsforest.
load_nsforest_binary_genes
(
nsforest_file
:
Path
,
dump_json
:
bool
=
False
,
json_path
:
Path
|
None
=
None
)
→
Tuple
[
Dict
[
str
,
List
[
str
]
]
,
DataFrame
]
[source]