Index

A

aggregate_vectors() (in module oadr_cpep.aggregate) aggregate_vectors_command() (in module oadr_cpep.cli)

apply_coefficients() (in module oadr_cpep.apply) apply_coefficients_command() (in module oadr_cpep.cli)

B

bootstrap_r2_ci() (in module oadr_cpep.common_utils)

C

consensus_features() (in module oadr_cpep.aggregate)

consensus_features_command() (in module oadr_cpep.cli) cv_predict() (in module oadr_cpep.common_utils)

D

design_matrix() (in module oadr_cpep.common_utils)

F

fit_lasso() (in module oadr_cpep.fit) fit_lasso_command() (in module oadr_cpep.cli) fit_models() (in module oadr_cpep.fit) fit_models_command() (in module oadr_cpep.cli)

fit_rf() (in module oadr_cpep.fit) fit_rf_command() (in module oadr_cpep.cli) fit_ridge() (in module oadr_cpep.fit) fit_ridge_command() (in module oadr_cpep.cli)

K

kfold() (in module oadr_cpep.common_utils)

L

load_features() (in module oadr_cpep.oadr_data) load_panel_a() (in module oadr_cpep.oadr_data)

load_panel_b() (in module oadr_cpep.oadr_data) load_site() (in module oadr_cpep.common_utils)

M

main() (in module oadr_cpep.cli) module oadr_cpep oadr_cpep.aggregate oadr_cpep.apply oadr_cpep.cli oadr_cpep.common_utils oadr_cpep.fit oadr_cpep.logging_config oadr_cpep.oadr_data oadr_cpep.plot oadr_cpep.select

mse() (in module oadr_cpep.common_utils)

O

oadr_cpep module oadr_cpep.aggregate module oadr_cpep.apply module oadr_cpep.cli module oadr_cpep.common_utils module

oadr_cpep.fit module oadr_cpep.logging_config module oadr_cpep.oadr_data module oadr_cpep.plot module oadr_cpep.select module

P

panel_a_design_matrix() (in module oadr_cpep.oadr_data)

panel_b_design_matrix() (in module oadr_cpep.oadr_data)

R

r2() (in module oadr_cpep.common_utils)

read_feature_list() (in module oadr_cpep.common_utils)

S

scatter() (in module oadr_cpep.plot) select_features() (in module oadr_cpep.select) select_features_command() (in module oadr_cpep.cli)

setup_logger() (in module oadr_cpep.logging_config) solo_vs_federated() (in module oadr_cpep.plot) stem() (in module oadr_cpep.common_utils)